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Biomedical Data Science Python Packages

Python packages with the GitHub topic biomedical-data-science. Sorted by monthly downloads, with stars and forks.
tylerdougan
waltlabtools

A collection of tools for biomedical research assay analysis in Python.

920 4 3
DandaPanda
refsig

Package for obtaining the referential signal from a set of unipolar iEEG data

504 1 2
jvwilliams23
pyssam

A Python library for biomedical statistical shape and appearance modelling.

114 40 2
robert-haas
kgw

Knowledge graph workflows with Python.

91 9 1
daveramseymusic
biobert-bern

Use bioBERT via BERN to label biomedical terms in docs

70 0 0
victorvicpal
biofes

Biomedical Feature Selection for Machine Learning Models

64 7 1
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology