PyRank

Biomarker Discovery Python Packages

Python packages with the GitHub topic biomarker-discovery. Sorted by relevance, with stars and monthly downloads.
nadeemlab
spatialprofilingtoolbox

Toolbox for spatial analysis of single cell data.

880 23 2
xinglab-ai
genomap

Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)

646 19 5
lpfann
fri

Python implementation of the feature relevance interval (FRI) algorithm

441 8 4
euxhenh
phenotype-cover

A package for biomarker selection based on multiset multicover and the cross-entropy-method.

258 3 0
infocusp
pyscalr

scaLR: Single cell analysis using low resource.

150 20 0
nadeemlab
smprofiler

Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)

147 23 2
ellenbet
survana

Survana: software for survival analysis and biomarker discovery using ensemble methods.

108 1 0