PyRank

Biomarker Discovery Python Packages

Python packages with the GitHub topic biomarker-discovery. Sorted by relevance, with stars and monthly downloads.
nadeemlab
spatialprofilingtoolbox

Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)

1K 23 2
xinglab-ai
genomap

Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)

525 19 5
lpfann
fri

Python implementation of the feature relevance interval (FRI) algorithm

488 8 4
nadeemlab
smprofiler

Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)

181 23 2
infocusp
pyscalr

Single cell analysis using Low Resource

150 20 0
euxhenh
phenotype-cover

phenotype_cover is a package for biomarker discovery using multiset multicover.

109 3 0
ellenbet
survana

Biomarker and survival analysis software for thesis.

72 1 0