PyRank

Biom Format Python Packages

Python packages with the GitHub topic biom-format. Sorted by relevance, with stars and monthly downloads.
smdabdoub
kraken-biom

Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

324 61 16
smdabdoub
clark-biom

Create BIOM-format tables (http://biom-format.org) from CLARK output (http://clark.cs.ucr.edu/) for use with downstream tools such as UniFrac, iTol (itol.embl.de), or PhyloToAST (phylotoast.org), PhyloToAST (http://phylotoast.org).

114 1 0