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Bioinformatics Algorithms Python Packages

Python packages with the GitHub topic bioinformatics-algorithms. Sorted by monthly downloads, with stars and forks.
bystrogenomics
bystro

Natural Language Search and Analysis of High Dimensional Genomic Data

3K 49 6
xjtu-omics
stminer

Python package for spatial transcriptomics data analysis

540 22 7
rfechtner
pypairs

PyPairs - A python scRNA-Seq classifier

464 3 4
cnapy-org
optlang-enumerator

Module for enumerating minimal cut sets

305 3 1
Peg-Wu
descopex

Decoding Single-Cell Omics of Perturbation Responses Using DeSCOPE

284 29 3
ScialdoneLab
ciara-python

Implementation of entropy of mixing algorithm in python

176 10 1
bystrogenomics
bystro-think

Natural Language Search and Analysis of High Dimensional Genomic Data

64 49 6
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology