Biocuration Python Packages

bioregistry

📮 An integrative registry of biological databases, ontologies, and nomenclatures.

biomappings

🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.

sssom-curator

Prediction and curation of semantic mappings in SSSOM

bel-enrichment

A package for generating curation sheets for rationally enriching a BEL graph using INDRA and PyBEL

hbp-knowledge

Knowledge curated in BEL from full text during the Human Brain Pharmacome project

pybel-git

Git and continuous integration tools for PyBEL to assist in curating BEL

conib

Curation of Neurodegeneration in Biological Expression Language (CONIB)