Bioconda Python Packages

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

pyrodigal

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

genomepy

genes and genomes at your fingertips

dajin2

🔬 Genotyping tool for genome-edited samples using nanopore-targeted sequencing

sniffles

Structural variation caller using third generation sequencing

protgraph

ProtGraph - A Graph-Generator for Proteins

run-dbcan

Standalone version of dbCAN annotation tool for automated CAZyme annotation

deepaccess

A package for training and interpreting an ensemble of neural networks for chromatin accessibility

pyrpipe

pyrpipe

multiqc-celescope

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc-msk

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc-vlad

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc-jupyterlab-helper

Aggregate results from bioinformatics analyses across many samples into a single report.