Approximate Bayesian Computation Python Packages

pyabcranger

ABC random forests for model choice and parameter estimation, pure C++ implementation

epydemix

epydemix, the ABC of epidemics

sbijax

Simulation-based inference in JAX

calisim

A toolbox for the calibration and evaluation of simulation models.

vpet-abc

This repo contains code that implements vPET-ABC. Currently, we have included Python code attempting GPU acceleration on FDG compartment models.

pyselfi

Simulator Expansion for Likelihood-Free Inference (SELFI): a python implementation

lotkavolterra-simulator

Simulator of the Lotka-Volterra prey-predator system with demographic and observational noise and biases