Alternative Splicing Python Packages

nease

NEASE: A network-based approach for the enrichment of alternative splicing events

thoraxe

Use Thor's Axe to cut exons into their evolutionary building blocks :zap:

transcriptorthology

Algorithm to infer clusters of isoorthologous transcripts using gene-level homology relationships and a Reciprocal Best Hits approach

spada

Find splicing-led, functional changes of the proteome.

altanalyze3

AltAnalyze3: Advanced RNA-Seq Analysis Workflow

astk

Alternative Splicing ToolKit

spycone

A splicing-aware time course network enricher

yasim

Yet Another SIMulator for Alternative Splicing Events and Realistic Gene Expression Profile