3d Structure Python Packages

icn3dpy

web-based protein structure viewer and analysis tool interactively or in batch mode

evcouplings

Evolutionary couplings from protein and RNA sequence alignments

contactextractor

Contact Extractor from PDB/mmCIF coordinate files

artem-rna

Aligning RNA TErtiary Motifs (ARTEM) is a tool for superimposing arbitrary RNA spatial structures

g3dtools

Generate and query genome 3D stucture (.g3d) file