PyRank

16s Python Packages

Python packages with the GitHub topic 16s. Sorted by monthly downloads, with stars and forks.
pnnl
hundo

:100: Snakemake-based amplicon processing protocol for 16S and ITS sequences.

483 13 7
erinyoung
spestimator

Uses 16S to identify a range of possible species.

236 0 0
smdabdoub
qiime-tools

Tools for phylogenetic data analysis including visualization and cluster-computing support.

101 15 3
dizak
mothulity

Easy-to-use tool facilitating work with Mothur.

80 3 3
smdabdoub
phylotoast

Tools for phylogenetic data analysis including visualization and cluster-computing support.

67 15 3
SushiLab
mtags

mTAGs - taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA gene.

48 7 2
FOI-Bioinformatics
flextaxd

FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )

47 68 8