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16s Rrna Python Packages

Python packages with the GitHub topic 16s-rrna. Sorted by monthly downloads, with stars and forks.
segrelab
micone

The Microbial Co-occurrence Network Explorer

492 21 4
xapple
crest4

The `crest4` python package can automatically assign taxonomic names to DNA sequences obtained from environmental sequencing.

326 5 1
systems-genomics-lab
deeptaxa-rrna

Hybrid CNN-BERT deep learning for hierarchical taxonomic classification of 16S rRNA sequences

239 11 0
dizak
mothulity

Easy-to-use tool facilitating work with Mothur.

80 3 3
xapple
pacmill

The `pacmill` python package is a bioinformatics pipeline that is developed to process microbial 16S amplicon sequencing data and produce PDF reports detailing taxonomical assignments along with other statistics.

75 2 0
gaarangoa
chfilter

Chloroplast 16S removal from Metagenomics samples (or any NGS samples)

59 1 0
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology