Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
Package Insights
((week_daily_avg - month_daily_avg) / month_daily_avg) * 100More insights and metrics
Downloads by OS
Python Versions
Top Countries
Weekly Downloads
GitHub Stars
Dependencies
- bioregistry >=0.13.25
- click
- deprecated >=1.2.13
- flask
- httpx >=0.24
- linkml >=1.10.0
- linkml-runtime >=1.10.0
- more-click
- more-itertools
- numpy
- pandas <3,>=2.0.0
- pyarrow >=23.0.1
- pydantic >=2.0
- pyld
- pyoxigraph <0.6,>=0.5.11
- pyyaml >=6.0
- rdflib >=6.0.0
- requests >=2.0
- sssom >=0.4
- tqdm
- typing-extensions >=4.0
- ujson >=5.0.0
36 optional dependencies
-
coverage[tests]extra == "tests"
-
flask>=3.0[web]extra == "web"
-
flask-cors>=4.0[web]extra == "web"
-
gunicorn>=22.0[web]extra == "web"
-
httpx>=0.24[tests]extra == "tests"
-
ipywidgets>=8.0.0[notebooks]extra == "notebooks"
-
jupyterlab>=4.0.0[notebooks]extra == "notebooks"
-
kgx>=2.7.0[notebooks]extra == "notebooks"
-
matplotlib>=3.10.7[notebooks]extra == "notebooks"
-
mcp==2.2.0[mcp]extra == "mcp"
-
mcp==2.2.0[tests]extra == "tests"
-
mypy[dev]extra == "dev"
-
narwhals==2.11.0[notebooks]extra == "notebooks"
-
networkx>=2.8[notebooks]extra == "notebooks"
-
networkx>=2.8[tests]extra == "tests"
-
pandas-stubs[dev]extra == "dev"
-
plotly>=5.0.0[notebooks]extra == "notebooks"
-
psutil>=5.9[tests]extra == "tests"
-
psutil>=5.9[notebooks]extra == "notebooks"
-
pydantic-ai-slim==2.0.0[agents]extra == "agents"
-
pydantic-ai-slim==2.0.0[tests]extra == "tests"
-
pyshacl<1,>=0.27[validation]extra == "validation"
-
pyshacl<1,>=0.27[tests]extra == "tests"
-
pytest[tests]extra == "tests"
-
python-dotenv==1.2.3[agents]extra == "agents"
-
ruff[dev]extra == "dev"
-
scipy>=1.15.3[notebooks]extra == "notebooks"
-
seaborn>=0.11.0[notebooks]extra == "notebooks"
-
sphinx>=8[docs]extra == "docs"
-
sphinx-automodapi[docs]extra == "docs"
-
sphinx-click[docs]extra == "docs"
-
sphinx-rtd-theme>=3.0[docs]extra == "docs"
-
types-networkx[dev]extra == "dev"
-
types-pyyaml[dev]extra == "dev"
-
types-requests[dev]extra == "dev"
-
types-ujson[dev]extra == "dev"