Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
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The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- av
- bioio >=1.0
- bioio-czi
- bioio-imageio
- bioio-ome-tiff
- bioio-tifffile
- cellpose <4
- hdf5plugin
- imaris-ims-file-reader
- largestinteriorrectangle
- matplotlib
- napari
- networkx
- numba
- numpy >=1.22
- opencv-python-headless
- openpyxl
- pandas
- pydantic
- pyqt5
- pywavelets
- scikit-image
- scikit-learn
- scipy
- seaborn
- simpleitk
- torch
- zarr >=2.12
27 optional dependencies
-
bioio-bioformats<2.0[bioformats]extra == "bioformats"
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black[dev]extra == "dev"
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build[dev]extra == "dev"
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csbdeep[stardist]extra == "stardist"
-
cupy-cuda11x[gpu]extra == "gpu"
-
devbio-napari[devbio-napari]extra == "devbio-napari"
-
myst-parser[docs]extra == "docs"
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numpy<2.1[bioformats]extra == "bioformats"
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plotly[plotly]extra == "plotly"
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plotly[plotly-interactive]extra == "plotly-interactive"
-
pre-commit[dev]extra == "dev"
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pyimagej[trackmate]extra == "trackmate"
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pyqtgraph[pyqtgraph]extra == "pyqtgraph"
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pyqtwebengine[plotly-interactive]extra == "plotly-interactive"
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pytest>=7.0[test]extra == "test"
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pytest>=7.0[dev]extra == "dev"
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pytest-cov[test]extra == "test"
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pytest-cov[dev]extra == "dev"
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pytest-qt[test]extra == "test"
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ruff[dev]extra == "dev"
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shapely[spatial]extra == "spatial"
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sphinx[docs]extra == "docs"
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sphinx-rtd-theme[docs]extra == "docs"
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stardist[stardist]extra == "stardist"
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torch<2.3.0,>=2.2.0[arm-mac](platform_system == "Darwin" and platform_machine == "arm64") and extra == "arm-mac"
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torchvision[arm-mac](platform_system == "Darwin" and platform_machine == "arm64") and extra == "arm-mac"
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twine[dev]extra == "dev"