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Dependencies
- biopython >=1.84
- huggingface-hub >=0.20
- matplotlib >=3.9
- numpy >=1.23
- pandas >=2.2.2
- seqmat >=1.3
18 optional dependencies
- einops[spliceformer]
- einops[all]
- geney[protein]
- mkdocs-material[docs]
- mkdocstrings[docs]
- openspliceai[all]
- openspliceai[openspliceai]
- pymdown-extensions[docs]
- pytest[dev]
- pytest-cov[dev]
- ruff[dev]
- spliceai[spliceai-keras]
- tensorflow[spliceai-keras]
- torch[spliceformer]
- torch[all]
- torch[openspliceai]
- torch[pangolin]
- torch[spliceai-pytorch]