Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
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The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- alifedata-phyloinformatics-convert >=0.17.0
- anytree >=2.8.0
- astropy >=5.3.4
- bitarray >=2.6.2
- bitstring >=3.1.9
- dendropy >=4.5.2
- deprecated >=1.2.13
- downstream >=1.21.10
- fishersrc >=0.1.15
- interval-search >=0.3.1
- iterpop >=0.3.4
- joblib >=1.0.0
- joinem >=0.9.2
- keyname >=0.6.0
- lazy-loader >=0.4
- lru-dict >=1.1.7
- matplotlib >=3.5.2
- mmh3 >=3.0.0
- more-itertools >=8.13.0
- mpmath >=1.1.0
- networkx >=2.6.3
- numpy >=2
- opytional >=0.1.0
- ordered-set >=4.1.0
- packaging >=23.0
- pandas <3,>=2
- pandera >=0.21.0
- phyloframe >=0.2.0
- polars !=1.37.*,!=1.39.*,>=1.10.0
- prettytable >=3.5.0
- pyarrow >=16.0.0
- python-slugify >=6.1.2
- safe-assert >=0.2.0
- scikit-learn >=0.17
- seaborn >=0.11.0
- sortedcontainers >=2.4.0
- statsmodels >=0.14.4
- tqdm >=4.62.3
- typing-extensions >=4.7.1
40 optional dependencies
-
biopython>=1.79[testing]extra == "testing"
-
biopython>=1.79[phylo-extra]extra == "phylo-extra"
-
black==22.10.0[testing]extra == "testing"
-
bumpver==2022.1120[release]extra == "release"
-
colorclade>=0.3.0[testing]extra == "testing"
-
contexttimer==0.3.3[testing]extra == "testing"
-
coverage>=7.6.1[testing]extra == "testing"
-
cppimport>=22.8.2[jit]extra == "jit"
-
flake8==3.7.8[testing]extra == "testing"
-
ipykernel==6.26.0[docs]extra == "docs"
-
ipython==8.12.3[docs]extra == "docs"
-
isort>=5.12.0[testing]extra == "testing"
-
iterify==0.1.0[testing]extra == "testing"
-
more-itertools>=8.13.0[testing]extra == "testing"
-
mypy==0.991[testing]extra == "testing"
-
nbsphinx==0.9.3[docs]extra == "docs"
-
numba!=0.62.0,>=0.60.0[jit]extra == "jit"
-
phylotrackpy==0.2.4[testing]extra == "testing"
-
phylotrackpy>=0.2.4[phylo-extra]extra == "phylo-extra"
-
pybind11==2.13.6[release]extra == "release"
-
pybind11==2.13.6[docs]extra == "docs"
-
pytest==8.3.3[testing]extra == "testing"
-
pytest-xdist==2.5.0[testing]extra == "testing"
-
pyyaml==6.0.1[testing]extra == "testing"
-
pyyaml==6.0.1[docs]extra == "docs"
-
ruff==0.1.11[testing]extra == "testing"
-
safe-assert==0.2.0[testing]extra == "testing"
-
scipy==1.14.1[testing]extra == "testing"
-
setuptools==75.5.0[release]extra == "release"
-
setuptools<81,>=75.0.0[testing]extra == "testing"
-
setuptools<81,>=75.0.0[jit]extra == "jit"
-
setuptools-scm==8.1.0[release]extra == "release"
-
sphinx==8.1.3[docs]extra == "docs"
-
sphinx-rtd-theme==3.0.2[docs]extra == "docs"
-
teeplot>=1.2.0[testing]extra == "testing"
-
tox==3.24.0[testing]extra == "testing"
-
tqdist==1.0[testing]extra == "testing"
-
twine==1.14.0[release]extra == "release"
-
uv==0.4.18[release]extra == "release"
-
wheel==0.45.0[release]extra == "release"