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Dependencies
- brain-isotopic-distribution >=1.5.8
- click
- dill >=0.3.5.1
- glycopeptidepy >=0.0.28
- glypy >=1.0.6
- jinja2 >=2.11.1
- lxml
- matplotlib >=3.4.3
- ms-deisotope >=0.0.55
- ms-peak-picker >=0.1.46
-
numpy
>=2.0.0
python_version >= "3.9"
- pyteomics
- python-idzip >=0.3.2
- pyzstd
- rdflib
- requests
- scikit-learn
- scipy
- six
- sparqlwrapper
- sqlalchemy <1.4.0
1 optional dependencies
-
glycopeptide-feature-learning[fragmentation-modeling]extra == "fragmentation-modeling"