Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- click
- docker
- graphviz
- layered-config-tree >=3.0.0
- loguru
- networkx
- pandas
- pandas-stubs
- pyarrow
- pyarrow-stubs
- pyyaml
- requests
- snakemake >=8.0.0
- snakemake-executor-plugin-slurm
- snakemake-interface-executor-plugins <9.0.0
- tqdm
- types-pyyaml
- vivarium-build-utils <3.0.0,>=2.0.2
21 optional dependencies
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black==22.3.0[dev]extra == "dev"
-
isort[dev]extra == "dev"
-
mypy[dev]extra == "dev"
-
pytest[dev]extra == "dev"
-
pytest[test]extra == "test"
-
pytest-cov[dev]extra == "dev"
-
pytest-cov[test]extra == "test"
-
pytest-mock[test]extra == "test"
-
pytest-mock[dev]extra == "dev"
-
sphinx<8.2.0[docs]extra == "docs"
-
sphinx<8.2.0[dev]extra == "dev"
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sphinx-autobuild[docs]extra == "docs"
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sphinx-autobuild[dev]extra == "dev"
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sphinx-autodoc-typehints[dev]extra == "dev"
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sphinx-autodoc-typehints[docs]extra == "docs"
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sphinx-click[dev]extra == "dev"
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sphinx-click[docs]extra == "docs"
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sphinx-rtd-theme[dev]extra == "dev"
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sphinx-rtd-theme[docs]extra == "docs"
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typing-extensions[dev]extra == "dev"
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typing-extensions[docs]extra == "docs"