Downloads in the 30 and 7 days to October 10, 2026. Refreshed weekly.
Package Information
No reported malware or high/critical advisories · Details
The current version has no OSV.dev malware reports and no critical or high-severity vulnerabilities.
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Dependencies
- biopython <2.0,>=1.83
- chart-studio <2.0,>=1.1.0
- dill <1.0,>=0.3.8
- freesasa <3.0,>=2.1.1
- h5py <4.0,>=3.11.0
- markov-clustering <1.0,>=0.0.6.dev0
- matplotlib <4.0,>=3.9.0
- networkx <4.0,>=3.1
- notebook <8.0,>=7.2.1
- numpy <2.0,>=1.25
- pdb2sql <1.0,>=0.5.3
- protobuf <6.0,>=3.20.1
- pyarrow <17.0,>=16.1.0
- python-louvain <1.0,>=0.16
- scikit-learn <2.0,>=1.5.0
- scipy <2.0,>=1.13.1
- tables <4.0,>=3.9.2
- tensorboard <3.0,>=0.9.0
- tqdm <5.0,>=4.66.4
12 optional dependencies
-
build[publishing]extra == "publishing"
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bump-my-version<1.0,>=0.24.2[test]extra == "test"
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coverage<7.0,>=6.5.0[test]extra == "test"
-
coveralls<4.0,>=3.3.1[test]extra == "test"
-
nbmake[notebooks]extra == "notebooks"
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pycodestyle<3.0,>=2.8.0[test]extra == "test"
-
pytest<8.0,>=7.4.0[test]extra == "test"
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pytest-cov<5.0,>=4.1.0[test]extra == "test"
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pytest-runner<7.0,>=6.0.0[test]extra == "test"
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ruff==0.6.3[test]extra == "test"
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twine[publishing]extra == "publishing"
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wheel[publishing]extra == "publishing"